I feel this sort of endeavour is just a poorly researches attempt at reinventing the wheel. Packaging formats such as Debian's .DEB format consist basically of the directory tree structure to be deployed archived with Zip along with a couple of metadata files. It's not rocket science. In contrast, these tricks sound like overcomplicated hacks.

If anything goes wrong with the deploy script, such as failing tests, no harm will be done because the script exits upon the first error encountered.

How do you clean up? Once the deploy script is fixed, how do you know what’s been done and what needs redoing?

Have you considered ansible/puppet/chef/salt — environments dedicated to deployment and cleanup, with idempotency to allow for fixing and repeating the deployment, across multiple operating systems and versions?